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ConvNext Mitosis IdentificationdYou Only Look Once (CNMI-YOLO): Domain Adaptive and Robust Mitosis Identification in Digital Pathology

dc.contributor.authorTopuz, Yasemin
dc.contributor.authorYildiz, Serdar
dc.contributor.authorVarl, Songul
dc.date.accessioned2026-06-27T14:59:59Z
dc.date.issued2024
dc.description.abstractIn digital pathology, accurate mitosis detection in histopathological images is critical for cancer diagnosis and prognosis. However, this remains challenging due to the inherent variability in cell morphology and the domain shift problem. This study introduces ConvNext Mitosis IdentificationYou Only Look Once (CNMI-YOLO), a new 2-stage deep learning method that uses the YOLOv7 architecture for cell detection and the ConvNeXt architecture for cell classification. The goal is to improve the identification of mitosis in different types of cancers. We utilized the Mitosis Domain Generalization Challenge 2022 data set in the experiments to ensure the model's robustness and success across various scanners, species, and cancer types. The CNMI-YOLO model demonstrates superior performance in accurately detecting mitotic cells, significantly outperforming existing models in terms of precision, recall, and F1 score. The CNMI-YOLO model achieved an F1 score of 0.795 on the Mitosis Domain Generalization Challenge 2022 and demonstrated robust generalization with F1 scores of 0.783 and 0.759 on the external melanoma and sarcoma test sets, respectively. Additionally, the study included ablation studies to evaluate various object detection and classification models, such as Faster-RCNN and Swin Transformer. Furthermore, we assessed the model's robustness performance on unseen data, confirming its ability to generalize and its potential for real-world use in digital pathology, using soft tissue sarcoma and melanoma samples not included in the training data set. (c) 2024 United States & Canadian Academy of Pathology. Published by Elsevier Inc. All rights are reserved, including those for text and data mining, AI training, and similar technologies.en
dc.description.sponsorshipTUSEB (Health Institutes of Turkiye) Group B RD Projects [24348]
dc.description.urihttps://doi.org/10.1016/j.labinv.2024.102130
dc.identifier.doi10.1016/j.labinv.2024.102130
dc.identifier.eissn1530-0307
dc.identifier.issn0023-6837
dc.identifier.issue10
dc.identifier.pubmed39233013
dc.identifier.urihttps://hdl.handle.net/20.500.14981/66960
dc.identifier.volume104
dc.identifier.wos001318398100001
dc.language.isoeng
dc.publisherELSEVIER SCIENCE INC
dc.relation.ispartofLABORATORY INVESTIGATION
dc.rightsopenAccess
dc.subjectcomputational pathology
dc.subjectdeep learning
dc.subjecthistopathology
dc.subjectmitosis
dc.subjectobject detection
dc.subjectMITOTIC COUNT
dc.subjectCHALLENGES
dc.subjectResearch & Experimental Medicine
dc.subjectPathology
dc.titleConvNext Mitosis IdentificationdYou Only Look Once (CNMI-YOLO): Domain Adaptive and Robust Mitosis Identification in Digital Pathology
dc.typeArticle
dspace.entity.typePublication
local.import.sourceWOS

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