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Hi-LabSpermMorpho: A Novel Expert-Labeled Dataset With Extensive Abnormality Classes for Deep Learning-Based Sperm Morphology Analysis

dc.contributor.authorAktas, Abdulsamet
dc.contributor.authorSerbes, Gorkem
dc.contributor.authorHuner Yigit, Merve
dc.contributor.authorAydin, Nizamettin
dc.contributor.authorUzun, Hakki
dc.contributor.authorOsman Ilhan, Hamza
dc.date.accessioned2026-06-27T15:14:49Z
dc.date.issued2024
dc.description.abstractSperm morphology is crucial in semen analysis for diagnosing male infertility. To reduce limitations in visual assessment, such as variability in biological conditions and the biologist's experience, developing computer-based sperm analysis techniques is imperative. In this study, a total of 49345 RGB sperm morphology patches were obtained using the proposed image acquisition technique and three different Diff-Quick staining methods: BesLab, Histoplus, and GBL. The images were labeled by experts under 18 classes, including sperm head, neck, and tail abnormality types, along with a normal class. The head category includes amorphous, tapered, double, pyriform, pin, vacuolated, narrow acrosome, and round. The neck category encompasses thin, thick, twisted, and asymmetrical. The tail category includes double, curly, long, short, and twisted. The Efficient-V2-Medium achieved accuracy rates of 65.05% and 67.42% on the BesLab and Histoplus datasets, respectively, while the GBL dataset yielded an accuracy of 63.58% using the Efficient-V2-Small. This study experimentally demonstrates that the Histoplus staining method is more suitable for deep learning-based automated analysis systems. As a reference for future studies, 35 different deep learning architectures were trained on the proposed dataset, establishing a classification baseline. The results show that the dataset can be successfully applied to complex deep learning models. Additionally, it addresses the absence of a large-scale sperm morphology analysis public datasets and can serve as a standard benchmark for future studies.en
dc.description.sponsorshipScientific and Technological Research Council of Turkey (TUBITAK) Academic Research Funding Programmes Directorate (ARDEB) [122E164]
dc.description.urihttps://doi.org/10.1109/access.2024.3521643
dc.identifier.doi10.1109/access.2024.3521643
dc.identifier.endpage196091
dc.identifier.issn2169-3536
dc.identifier.startpage196070
dc.identifier.urihttps://hdl.handle.net/20.500.14981/69440
dc.identifier.volume12
dc.identifier.wos001386558700043
dc.language.isoeng
dc.publisherIEEE-INST ELECTRICAL ELECTRONICS ENGINEERS INC
dc.relation.ispartofIEEE ACCESS
dc.rightsopenAccess
dc.subjectMorphology
dc.subjectHead
dc.subjectDeep learning
dc.subjectTail
dc.subjectAccuracy
dc.subjectMagnetic heads
dc.subjectBenchmark testing
dc.subjectSupport vector machines
dc.subjectStandards
dc.subjectReviews
dc.subjectDataset benchmark
dc.subjectdiff-quick staining methods
dc.subjectinfertility diagnosis
dc.subjectsperm morphology analysis
dc.subjecttransformer
dc.subjectACROSOME INTEGRITY
dc.subjectGOLD-STANDARD
dc.subjectSPERMATOZOA
dc.subjectCLASSIFICATION
dc.subjectTEXTURE
dc.subjectIMAGES
dc.subjectSEMEN
dc.subjectComputer Science
dc.subjectEngineering
dc.subjectTelecommunications
dc.titleHi-LabSpermMorpho: A Novel Expert-Labeled Dataset With Extensive Abnormality Classes for Deep Learning-Based Sperm Morphology Analysis
dc.typeArticle
dspace.entity.typePublication
local.import.sourceWOS

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