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A study of Bos taurus muscle specific enolase; biochemical characterization, homology modelling and investigation of molecular interaction using molecular docking and dynamics simulations

dc.contributor.authorSariyer, Emrah
dc.contributor.authorYakarsonmez, Sinem
dc.contributor.authorDanis, Ozkan
dc.contributor.authorTurgut-Balik, Dilek
dc.date.accessioned2026-06-27T14:15:37Z
dc.date.issued2018
dc.description.abstractTropical theileriosis caused by Theileria annulata obligate parasite that infect ruminant animals, including Bos taurus. The disease results massive economic losses in livestock production worldwide. Here we describe cloning, expression and both biochemical and structural characterization of beta enolase from Bos taurus in vitro and in silico. The interconversion of 2-phosphoglycerate to phosphoenolpyruvate was catalyzed by enolase is a metalloenzyme in glycolytic pathway and gluconeogenesis. Enolase from Bos taurus was cloned, expressed and the protein was purified at 95% purity using cobalt column by affinity chromatography. The optimum enzymatic activity was calculated at pH 6.5. For the first time in the literature, the kinetic parameters of the enzyme, Vmax and Km, were measured as 0.1141 mM/min and 0.514 mM, respectively. Besides, Bos taurus enolase 3-dimensional structure was built by homology modelling to be used in silico analyses. The interactions of the enzyme-substrate complex were elucidated by molecular dynamics simulations for 100 ns. These interactions were found to be the same as experimentally determined interactions in yeast. These results would enable further structure based drug design studies with the biochemical characterization of the host organism Bos taurus enolase enzyme in vitro and the elucidation of behavior of enzyme-substrate complex in silico. (C) 2018 Elsevier B.V. All rights reserved.en
dc.description.sponsorshipYildiz Technical University Scientific Research Projects Coordination Department [2015-07-04-KAP07]
dc.description.urihttps://doi.org/10.1016/j.ijbiomac.2018.08.184
dc.identifier.doi10.1016/j.ijbiomac.2018.08.184
dc.identifier.eissn1879-0003
dc.identifier.endpage2353
dc.identifier.issn0141-8130
dc.identifier.pubmed30172809
dc.identifier.startpage2346
dc.identifier.urihttps://hdl.handle.net/20.500.14981/58564
dc.identifier.volume120
dc.identifier.wos000449892800108
dc.language.isoeng
dc.publisherELSEVIER
dc.relation.ispartofINTERNATIONAL JOURNAL OF BIOLOGICAL MACROMOLECULES
dc.rightsopenAccess
dc.subjectEnolase
dc.subjectPurification
dc.subjectBiochemical characterization
dc.subjectHomology modelling
dc.subjectMolecular docking
dc.subjectMolecular dynamics simulations
dc.subjectTHEILERIA-ANNULATA
dc.subjectCRYSTAL-STRUCTURE
dc.subjectGENE
dc.subjectCLONING
dc.subjectMECHANISM
dc.subjectALIGNMENT
dc.subjectCOMPLEX
dc.subjectQUALITY
dc.subjectENZYME
dc.subjectBiochemistry & Molecular Biology
dc.subjectChemistry
dc.subjectPolymer Science
dc.titleA study of Bos taurus muscle specific enolase; biochemical characterization, homology modelling and investigation of molecular interaction using molecular docking and dynamics simulations
dc.typeArticle
dspace.entity.typePublication
local.import.sourceWOS

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